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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015849041.1_cds_XP_016510647.1_23463
CDS Infomation

[gene=LOC107827926] [db_xref=GeneID:107827926] [protein=transcription factor PIF3-like] [protein_id=XP_016510647.1] [location=complement(join(99736..100188,100746..100811,100943..101008,101134..101238,101589..102762,103888..103976))] [gbkey=CDS]
Sequence

ATGCCTCTCTCTGAGTTCTTGAAAATGGCTAGAGGGAAGCTTGAATCTGGCCAGGAGAAA
AGGTCATCCACAACTGATCCGTCCTCTAGTCTTGAGGATGAATTGGTAGAGCTAGTATGG
GAAAATGGTCAAATTGTGATGCAAAGTCGGTCCAGCAGAGCTAAGAAGAGCCCTACTTTT
ATTAATCTTCCATCAAGCTCTCTGAGAGTTAAAGACAAGTTCACTGGGAATTCCTCAACC
ACAAAGATCGGAAAATTTGGTGTAATGGACTCTATGTTTGATAATATGCCATTATCTGTG
CCCAATGATGAAATGGAGTTGACTGAAGAGGATGAAATGGTGCCTTGGTTGAGTTATTCT
GCAAATGATAGCCCACAACAAGATTATCATTCTCCACTGTTACCAGAAATATCTGGTCTG
ACGGTCAATGAACCATCTGGTAGGAGAGGATTTGCATCAATGGATAAGAGAGGTATTTCT
AATCAGATGAATGGGGCTTCACATAGTGTTCCCATTCATAACATTGTGAACTCAGAACAA
GGAAATGCATCAAAGCTCTCTCCTTCTACATTTAACCTGTTATGTTCAGGGGCACCAAAG
AAATCTTCGGCACCAATTCTGCCCCTAGGATCACGAATCTCAGATATTATTAGCAGTAAT
ACTAGCTGCAATATGCCAGTTTCCACTTTTGGATATTCAAATTCAAGTCAAGCTTCAGCT
GGTGTTATCAAAAGCATGAAGATGCAAAAGCAAAACATACCTGGAAATAGCTCCAGTTTG
TTGAACTTCGCGCATTTCTCAAGACCTATTACTGGGGGTTCAGCTGTTTCAGGCTCGTCT
ACCATAGGAGCAAGGGGAAATATAGAGAGAGAGAATGGGGGAAGTAGCAGAAATCGTGTT
AGTGAGGTACCATTTGAATCATACTTCAGTTCAGAAAAGGAAAATGATGTCCATTCTCCA
CCTTATATGGCATCTTCCAAAGTCGAGTCAAAAGGATCTGTCGGCCTTCACGAGAGGGCA
TGTCCCATTGAACAGTCTGATAATTTATGCGGAGATAGTCCAAGTAATAATGACATGTCT
CGTGATCAATTTACTGGTGCAAATGCAATCAAAGAATTTCCTGATGGTGAGAGAAATGTT
GAACCTGTAGTTGTGTGTTCATCTGTATGCTCTGGCAGTAGCGCAGAGAGAGCATCAAGT
GATCATCCTCGTACTTTGAAAAGGAAAACTCGTGACAACGAGGAGTCTGAATTCCAAAGT
GAAGATGTTGAAGAAGAATCTGTTGGTATCAAAAGCGCTTATCCTGCTCGAGGAGGTGCA
GGTTCAAAGAGAAGCAGAGCTGCAGAAGTGCATAATCTATCTGAGCGGAGGCGAAGGGAT
AGGATTAATGAGAAGATGAGTGCATTACAGGATCTCATACCAAACTGCAATAAGGTGGAT
AAAGCCTCAATGCTCGATGAAGCTATTGAATACTTGAAGACACTTCAAGTTCAAGTACAG
ATGATGTCTATGGGAGCTGGGTTGTGTGCGCCACCAATGATGTTTCCTGCAGGAATTCAA
TACATGCATGCCGCCAATGTGCCACAATTTTCTCCGATGGGTTTAGGGATGGGAATGGGT
TTTGGGATGGGTAAACTTGAGATGAATGGTGGATCCCCTGGCTGCTCTATTTATCCAATA
CCCACTATGCAAGGAGCACATCTTCACTCCCCACCAGTTTCTGGCTCCGCTACTTTTCCA
GGAGTAGCTGGATGTAACCTTCACTCTTTTAGGCATCCTGGTCAAGGACTTCCAGTGTCG
GTACCACCTGCATCTTTGGTTCCTTTGGCAGGGCAACCATCGACAAATGCAGCTGTGGGT
TTAAATATCACAACTGCAGGAGTTCATACAGACGTACGGAATACTTCAACTTTAGACCCC
GAAACCAAGGACGCACTAAGAACTCACATATAA

Peptide Sequence

PEP ID

XP_016510647.1
PEP Infomation

PREDICTED: transcription factor PIF3-like [Nicotiana tabacum]
Sequence

MPLSEFLKMARGKLESGQEKRSSTTDPSSSLEDELVELVWENGQIVMQSRSSRAKKSPTF
INLPSSSLRVKDKFTGNSSTTKIGKFGVMDSMFDNMPLSVPNDEMELTEEDEMVPWLSYS
ANDSPQQDYHSPLLPEISGLTVNEPSGRRGFASMDKRGISNQMNGASHSVPIHNIVNSEQ
GNASKLSPSTFNLLCSGAPKKSSAPILPLGSRISDIISSNTSCNMPVSTFGYSNSSQASA
GVIKSMKMQKQNIPGNSSSLLNFAHFSRPITGGSAVSGSSTIGARGNIERENGGSSRNRV
SEVPFESYFSSEKENDVHSPPYMASSKVESKGSVGLHERACPIEQSDNLCGDSPSNNDMS
RDQFTGANAIKEFPDGERNVEPVVVCSSVCSGSSAERASSDHPRTLKRKTRDNEESEFQS
EDVEEESVGIKSAYPARGGAGSKRSRAAEVHNLSERRRRDRINEKMSALQDLIPNCNKVD
KASMLDEAIEYLKTLQVQVQMMSMGAGLCAPPMMFPAGIQYMHAANVPQFSPMGLGMGMG
FGMGKLEMNGGSPGCSIYPIPTMQGAHLHSPPVSGSATFPGVAGCNLHSFRHPGQGLPVS
VPPASLVPLAGQPSTNAAVGLNITTAGVHTDVRNTSTLDPETKDALRTHI

Transcript Sequence

Gene sequence data has not been registered.